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Jul 22, 2026

Gut Microbiome in HIV Pathogenesis: Dysbiosis, Immune Dysfunction, and Viral Persistence

Narrative review synthesizes evidence that gut dysbiosis in HIV infection perpetuates systemic inflammation, impairs immune reconstitution, and may sustain latent viral reservoirs despite effective ART.

Evidence levelDNarrative / animal / in vitro / mechanistic
Study typenarrative_review
Sample
Effect directionInsufficient
CertaintyVery low
Clinical applicabilityVery low
Overinterpretation risk1/5 · Low
PICO
Population
Intervention
Comparator
Outcome

What the study showed

Early HIV replication in the GALT triggers a self-reinforcing cycle of CD4+ T-cell depletion, epithelial barrier breakdown, and microbial translocation that persists under ART. Dysbiosis is characterized by loss of butyrate-producing commensals and enrichment of pro-inflammatory taxa, alongside disruptions in SCFAs and tryptophan catabolites. These changes are associated with residual immune activation and incomplete viral reservoir clearance.

How it was done

Narrative review consolidating current literature on microbiome-HIV interactions, incorporating multi-omics technologies and experimental models including gnotobiotic and humanized mice and intestinal organoids.

Risk of bias

As a narrative review without formal meta-analysis, no quantitative synthesis or systematic bias assessment is provided. Selection criteria for included studies are not described in the abstract, limiting reproducibility.

Interpretation limit

What this study does NOT prove

The review does not establish direct causality between any specific dysbiotic pattern and viral persistence, nor efficacy of microbiome interventions on HIV clinical outcomes.

In clinical practice

No direct therapeutic recommendation can be derived; findings underscore the relevance of intestinal health monitoring in HIV patients on ART without pointing to validated microbiome-based interventions.

Limitations

As a narrative review without formal meta-analysis, no quantitative synthesis or systematic bias assessment is provided. Selection criteria for included studies are not described in the abstract, limiting reproducibility.

Technical appendix

Version history

  • 1.0 · 2026-07-22 — Auto-generated under Evidence Standard v1.0
Source: DOI 10.3390/ijms27114830 · 2026

Paid access: structured summary from public metadata; consult the original study at the source.

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